mpiblast, SGE and MPICH2 integration

Posted by chris Mon, 21 Apr 2008 15:49:28 GMT

Matthias Neder has posted a quick summary of a tightly integrated MPICH2 integration that can successfully handle his mpiblast application integration.

The summarized solution can be found here:
http://gridengine.sunsource.net/servlets/ReadMsg?listName=users&msgNo=24204

tight MPICH2 integration broken with mpich2-1.0.6p1

Posted by chris Fri, 25 Jan 2008 13:53:56 GMT

If you are interested in tightly integrated MPICH2 environments, keep an eye on this mailing list thread. It seems that a current release (mpich2-1.06p1) has some sort of changed behavior that breaks the existing methods for tight integration as documented in the HOWTO.

Older versions of the mpich2 code (version 1.04p1) still seem to integrate without error.